{"id":248,"date":"2011-03-20T23:13:41","date_gmt":"2011-03-20T23:13:41","guid":{"rendered":"http:\/\/ahay.org\/blog\/?p=248"},"modified":"2015-09-07T21:45:13","modified_gmt":"2015-09-07T21:45:13","slug":"how-do-i-prepare-a-geophysics-article-for-submission","status":"publish","type":"post","link":"https:\/\/ahay.org\/blog\/2011\/03\/20\/how-do-i-prepare-a-geophysics-article-for-submission\/","title":{"rendered":"How do I prepare a Geophysics article for submission?"},"content":{"rendered":"<p><img decoding=\"async\" src=\"\/blog\/wp-content\/uploads\/2015\/08\/Geophysics.jpg\" align=\"right\" \/> The <a href=\"http:\/\/www.seg.org\/resources\/publications\/geophysics\/instructionstoa\">Geophysics instructions to authors<\/a> state <\/p>\n<blockquote>\n<p>Preferred formats for production are Microsoft Word and LaTeX, in that order.<\/p>\n<\/blockquote>\n<p>Never mind the order. If you use LaTeX, you are not alone. According to SEG staff, half of submitted papers use LaTeX, including papers from many of the SEG editors. The <a href=\"\/wiki\/SEGTeX\">SEGTeX<\/a> package has been downloaded from <a href=\"http:\/\/sourceforge.net\/projects\/segtex\/\">SourceForge<\/a> more than 5,000 times. Here are some useful trips for producing a Geophysics paper with SCons and <a href=\"https:\/\/github.com\/ahay\/src\/blob\/master\/framework\/rsf\/tex.py\">rsf.tex<\/a>: <\/p>\n<p>1. If you don&#8217;t use Madagascar for your computations but would like to use the SCons setup for papers, you can download and install the <a href=\"http:\/\/sourceforge.net\/projects\/rsf\/files\/madagascar\/madagascar-1.1\/madagascar-framework-1.1-1.tar.gz\/download\">madagascar-framework<\/a> Python package.<\/p>\n<p>2. To prepare a paper called <tt>article.tex<\/tt> for submission, put  <\/p>\n<div class=\"code-box\"><div class=\"code-title\"><i class=\"fa fa-code\"><\/i> <div class=\"pull-right\"><a href=\"#\" class=\"btn btn-default btn-xs toggle-code\" data-toggle=\"tooltip\" title=\"Toggle code\"><i class=\"fa fa-toggle-up\"><\/i><\/a><\/div><\/div><pre ><code>use rsf.tex\nPaper('article',options='manuscript')\n<\/code><\/pre><\/div>\n<p>\nin you <tt>SConstruct<\/tt>, then run <tt>scons article.pdf<\/tt> to produce the manuscript or <tt>scons article.read<\/tt> to display it on the screen. If your paper is named <tt>paper.tex<\/tt>, you can also put the options in <\/p>\n<div class=\"code-box\"><div class=\"code-title\"><i class=\"fa fa-code\"><\/i> <div class=\"pull-right\"><a href=\"#\" class=\"btn btn-default btn-xs toggle-code\" data-toggle=\"tooltip\" title=\"Toggle code\"><i class=\"fa fa-toggle-up\"><\/i><\/a><\/div><\/div><pre ><code>End(options='manuscript')\n<\/code><\/pre><\/div>\n<p>and use simply <tt>scons pdf<\/tt> and <tt>scons read<\/tt>. See the <a href=\"\/wiki\/SCons\">wiki documentation<\/a> for more options and explanations.<\/p>\n<p>3. Submit your paper by login into <a href=\"https:\/\/mc.manuscriptcentral.com\/geophysics\">ManuscriptCentral<\/a>.<\/p>\n<p>4. After your paper goes through a round of revisions, you will be asked to prepare and submit both the new version and the revised version with the revision clearly marked. Use <tt>\\old{}<\/tt> and <tt>\\new{}<\/tt> macros to mark your changes, as shown in the <a href=\"\/wikilocal\/docs\/geophysics_example.pdf\">example<\/a>. You can produce both PDF files from once source using something like <\/p>\n<div class=\"code-box\"><div class=\"code-title\"><i class=\"fa fa-code\"><\/i> <div class=\"pull-right\"><a href=\"#\" class=\"btn btn-default btn-xs toggle-code\" data-toggle=\"tooltip\" title=\"Toggle code\"><i class=\"fa fa-toggle-up\"><\/i><\/a><\/div><\/div><pre ><code>use rsf.tex\nPaper('article',options='manuscript')\n\nCommand('article-revised.tex','article.tex','cp $SOURCE $TARGET') \nPaper('article-revised', options='manuscript,revised')\n<\/code><\/pre><\/div>\n<p>5. When submitting the final version, you will be asked to submit the LaTeX file that includes bibliography. If you use BibTeX, do the following: <\/p>\n<ol>\n<li>Run <tt>scons article.pdf<\/tt><\/li>\n<li>Open <tt>article.ltx<\/tt> in an editor and replace the line <tt>\\bibliography{}<\/tt> with the contents of <tt>article.bbl<\/tt>.<\/li>\n<li>Submit <tt>article.ltx<\/tt>.<\/li>\n<\/ol>\n<p>6. When submitting the final version, you will be asked to submit high-resolution figures in EPS format. Run <tt>scons article.figs<\/tt> to generate figures suitable for submission.<\/p>\n<p>7. Geophysics may insist that the labels on the vertical axis in your Madagascar plots should run horizontally, rather than vertically. To comply with this bizarre requirement, you may need to regenerate your plots using <tt>parallel2=n<\/tt> option.<\/p>\n<p>See also:<\/p>\n<ul>\n<li><a href=\"\/blog\/2008\/10\/15\/a-journal-requires-a-particular-font-e-g-arial-or-helvetica-in-figure-labels-how-do-i-achieve-that\/\">A journal requires a particular font (e.g. Arial or Helvetica) in figure labels. How do I achieve that?<\/a><\/li>\n<li><a href=\"\/blog\/2008\/03\/26\/a-journal-requires-tick-labels-on-my-plots-to-be-oriented-vertically-and-aligned-on-the-left-how-do-i-achieve-that\/\">A journal requires tick labels on my plots to be oriented vertically and aligned on the left. How do I achieve that?<\/a><\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>The Geophysics instructions to authors state Preferred formats for production are Microsoft Word and LaTeX, in that order. Never mind the order. If you use LaTeX, you are not alone. According to SEG staff, half of submitted papers use LaTeX, including papers from many of the SEG editors. The SEGTeX package has been downloaded from [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_import_markdown_pro_load_document_selector":0,"_import_markdown_pro_submit_text_textarea":"","activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":4,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":""},"categories":[4],"tags":[],"class_list":["post-248","post","type-post","status-publish","format-standard","hentry","category-faq"],"_links":{"self":[{"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/posts\/248","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/comments?post=248"}],"version-history":[{"count":3,"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/posts\/248\/revisions"}],"predecessor-version":[{"id":22437,"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/posts\/248\/revisions\/22437"}],"wp:attachment":[{"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/media?parent=248"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/categories?post=248"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/ahay.org\/blog\/wp-json\/wp\/v2\/tags?post=248"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}